54a24ca84a57a7d5b06687939f3797b5 - 3 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

4

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	RiPP-like	63,607	74,788

19

Region	Type	From	To	Most similar known cluster		Similarity
Region 19.1	lanthipeptide-class-iii	1	10,488

contig-100_30.30

Region	Type	From	To	Most similar known cluster		Similarity
Region 55.1	NRPS	12,963	36,202

Region	Type	From	To	Similarity
Region 4.1	RiPP-like	63,607	74,788
Region 19.1	lanthipeptide-class-iii	1	10,488
Region 55.1	NRPS	12,963	36,202

No secondary metabolite regions were found in these records:: 1; 2; 3; 5; 6; 7; 8; 9; 10; 11; 12; 13; 14; 15; 16; 17; 18; 20; 21; 22; 23; 24; 25; 26; 27; 28; 29; 30; 31; 32; contig-100_2.2; contig-100_3.3; contig-100_4.4; contig-100_5.5; contig-100_6.6; contig-100_7.7; contig-100_9.9; contig-100_11.11; contig-100_12.12; contig-100_13.13; contig-100_14.14; contig-100_15.15; contig-100_17.17; contig-100_18.18; contig-100_19.19; contig-100_20.20; contig-100_21.21; contig-100_22.22; contig-100_23.23; contig-100_24.24; contig-100_25.25; contig-100_27.27; contig-100_31.31; contig-100_32.32; contig-100_33.33; contig-100_34.34; contig-100_35.35; contig-100_36.36; contig-100_38.38; contig-100_39.39; contig-100_41.41; contig-100_42.42; contig-100_43.43; contig-100_45.45; contig-100_46.46; contig-100_47.47; contig-100_48.48; contig-100_49.49; contig-100_50.50; contig-100_52.52; contig-100_53.53; contig-100_55.55; contig-100_56.56; contig-100_58.58; contig-100_59.59; contig-100_60.60; contig-100_61.61; contig-100_62.62; contig-100_63.63; contig-100_64.64; contig-100_65.65; contig-100_66.66; contig-100_67.67; contig-100_68.68; contig-100_69.69; contig-100_70.70; contig-100_71.71; contig-100_72.72; contig-100_73.73; contig-100_74.74; contig-100_75.75; contig-100_76.76; contig-100_77.77; contig-100_79.79; contig-100_80.80; contig-100_82.82; contig-100_83.83; contig-100_84.84; contig-100_85.85; contig-100_87.87; contig-100_88.88; contig-100_89.89; contig-100_90.90; contig-100_91.91; contig-100_92.92; contig-100_93.93; contig-100_94.94; contig-100_95.95; contig-100_96.96; contig-100_98.98; contig-100_99.99; contig-100_100.100; contig-100_102.102; contig-100_103.103; contig-100_104.104; contig-100_105.105; contig-100_106.106; contig-100_109.109; contig-100_110.110; contig-100_111.111; contig-100_112.112; contig-100_113.113; contig-100_114.114; contig-100_116.116; contig-100_118.118; contig-100_119.119; contig-100_120.120; contig-100_121.121; contig-100_122.122; contig-100_123.123; contig-100_124.124; contig-100_125.125; contig-100_126.126; contig-100_127.127; contig-100_128.128; contig-100_129.129; contig-100_130.130; contig-100_131.131; contig-100_132.132; contig-100_133.133; contig-100_134.134; contig-100_135.135; contig-100_137.137; contig-100_138.138; contig-100_139.139; contig-100_140.140; contig-100_141.141; contig-100_142.142; contig-100_143.143; contig-100_144.144; contig-100_145.145; contig-100_146.146; contig-100_147.147; contig-100_148.148; contig-100_149.149; contig-100_150.150; contig-100_151.151; contig-100_152.152; contig-100_153.153; contig-100_154.154; contig-100_155.155; contig-100_156.156; contig-100_157.157; contig-100_158.158; contig-100_159.159; contig-100_160.160; contig-100_162.162; contig-100_163.163; contig-100_164.164; contig-100_165.165; contig-100_166.166; contig-100_167.167; contig-100_168.168; contig-100_170.170; contig-100_171.171; contig-100_172.172; contig-100_175.175; contig-100_176.176; contig-100_179.179; contig-100_180.180; contig-100_181.181; contig-100_182.182; contig-100_184.184; contig-100_185.185; contig-100_186.186; contig-100_187.187; contig-100_188.188; contig-100_189.189; contig-100_190.190; contig-100_191.191; contig-100_192.192; contig-100_193.193; contig-100_194.194; contig-100_195.195; contig-100_196.196; contig-100_197.197; contig-100_198.198; contig-100_199.199; contig-100_200.200; contig-100_203.203; contig-100_204.204; contig-100_206.206; contig-100_207.207; contig-100_208.208; contig-100_209.209; contig-100_210.210; contig-100_211.211; contig-100_212.212; contig-100_213.213; contig-100_214.214; contig-100_215.215; contig-100_216.216; contig-100_218.218; contig-100_219.219; contig-100_220.220; contig-100_221.221; contig-100_223.223; contig-100_224.224; contig-100_225.225; contig-100_226.226; contig-100_227.227; contig-100_228.228; contig-100_229.229; contig-100_230.230; contig-100_232.232; contig-100_233.233; contig-100_234.234; contig-100_235.235; contig-100_236.236; contig-100_237.237; contig-100_238.238; contig-100_239.239; contig-100_240.240; contig-100_241.241; contig-100_242.242; contig-100_243.243; contig-100_244.244; contig-100_245.245; contig-100_246.246; contig-100_247.247; contig-100_249.249; contig-100_250.250; contig-100_251.251; contig-100_252.252; contig-100_253.253; contig-100_254.254; contig-100_255.255; contig-100_256.256; contig-100_257.257; contig-100_258.258; contig-100_259.259; contig-100_260.260; contig-100_261.261; contig-100_262.262; contig-100_263.263; contig-100_265.265; contig-100_266.266; contig-100_267.267; contig-100_268.268; contig-100_269.269; contig-100_271.271; contig-100_272.272; contig-100_273.273; contig-100_274.274; contig-100_275.275; contig-100_276.276; contig-100_278.278; contig-100_279.279; contig-100_280.280; contig-100_281.281; contig-100_282.282; contig-100_284.284; contig-100_285.285; contig-100_286.286; contig-100_287.287; contig-100_288.288; contig-100_289.289; contig-100_290.290; contig-100_291.291; contig-100_292.292; contig-100_293.293; contig-100_294.294; contig-100_296.296; contig-100_297.297; contig-100_298.298; contig-100_299.299; contig-100_300.300; contig-100_301.301; contig-100_302.302; contig-100_303.303; contig-100_304.304; contig-100_305.305; contig-100_306.306; contig-100_307.307; contig-100_309.309; contig-100_310.310; contig-100_311.311; contig-100_312.312; contig-100_313.313; contig-100_314.314; contig-100_316.316; contig-100_317.317; contig-100_318.318; contig-100_319.319; contig-100_320.320; contig-100_322.322; contig-100_323.323; contig-100_324.324; contig-100_325.325; contig-100_326.326; contig-100_328.328; contig-100_329.329; contig-100_330.330; contig-100_331.331; contig-100_332.332; contig-100_333.333; contig-100_334.334; contig-100_335.335; contig-100_336.336; contig-100_337.337; contig-100_338.338; contig-100_339.339; contig-100_340.340; contig-100_341.341; contig-100_342.342; contig-100_343.343; contig-100_344.344; contig-100_345.345; contig-100_346.346; contig-100_348.348; contig-100_349.349; contig-100_350.350; contig-100_351.351; contig-100_352.352; contig-100_353.353; contig-100_354.354; contig-100_356.356; contig-100_357.357; contig-100_359.359; contig-100_360.360; contig-100_361.361; contig-100_362.362; contig-100_363.363; contig-100_364.364; contig-100_365.365; contig-100_366.366; contig-100_367.367; contig-100_368.368; contig-100_369.369; contig-100_370.370; contig-100_371.371; contig-100_372.372; contig-100_373.373; contig-100_374.374; contig-100_375.375; contig-100_376.376; contig-100_377.377; contig-100_378.378; contig-100_379.379; contig-100_380.380; contig-100_381.381; contig-100_382.382; contig-100_383.383; contig-100_384.384; contig-100_385.385; contig-100_386.386; contig-100_388.388; contig-100_389.389; contig-100_390.390; contig-100_391.391; contig-100_392.392; contig-100_393.393; contig-100_394.394

Compact view

4 - Region 1 - RiPP-like

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Location: 63,607 - 74,788 nt. (total: 11,182 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

19 - Region 1 - lanthipeptide-class-iii

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Location: 1 - 10,488 nt. (total: 10,488 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iii: (micKC and not PKS_KS)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Lanthipeptides

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.

contig-100_30.30 - Region 1 - NRPS

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Location: 12,963 - 36,202 nt. (total: 23,240 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS monomers

NRPS/PKS monomer predictions

ctg55_39

Search NORINE for peptide: strict or relaxed

AMP-binding (21..234): Ala

nrpys: Ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVTSMALIYK
Nearest Stachelhaus code(s):: Ala DVTNFALIYK (65% 8Å match)
Stachelhaus code match:: 80% (moderate)

ctg55_40

AMP-binding (10..152): X