LOCUS       KV830725.1              4399 bp    DNA     linear   UNK 01-JAN-1980
DEFINITION  KV830725.1 Staphylococcus sp. HMSC062C03 genomic scaffold
            Scaffold106, whole genome shotgun sequence.
ACCESSION   KV830725
VERSION     KV830725.1
KEYWORDS    .
SOURCE      
  ORGANISM  
            .
COMMENT     ##antiSMASH-Data-START##
            Version      :: 7.0.0
            Run date     :: 2023-10-04 11:22:19
            NOTE: This is a single region extracted from a larger record!
            Orig. start  :: 0
            Orig. end    :: 4399
            ##antiSMASH-Data-END##
FEATURES             Location/Qualifiers
     CDS             complement(1..257)
                     /ID="cds-HMPREF2699_05550"
                     /Note="internal stop; incomplete; too short partial
                     abutting assembly gap; missing stop"
                     /gbkey="CDS"
                     /gene="HMPREF2699_05550"
                     /inference="EXISTENCE: similar to AA
                     sequence:SwissProt:P0A043.1"
                     /locus_tag="HMPREF2699_05550"
                     /phase="0"
                     /product="integrase"
                     /pseudo="true"
                     /source="Protein Homology"
                     /transl_table=11
                     /translation="MNYFRYKQFSKDVITVAVGYYLRYALSYRDISEILRERGVNVHHS
                     TVYR"
     protocluster    1..4399
                     /aStool="rule-based-clusters"
                     /category="RiPP"
                     /contig_edge="True"
                     /core_location="[1282:3445]"
                     /cutoff="20000"
                     /detection_rule="(strepbact or Antimicrobial14 or
                     Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or
                     Bacteriocin_IIi or Lactococcin or Antimicrobial17 or
                     Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin
                     or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or
                     TIGR03795 or TIGR03975 or TIGR01193 or (YcaO or
                     TIGR03604))"
                     /neighbourhood="5000"
                     /product="RiPP-like"
                     /protocluster_number="1"
                     /tool="antismash"
     proto_core      1283..3445
                     /aStool="rule-based-clusters"
                     /tool="antismash"
                     /cutoff="20000"
                     /detection_rule="(strepbact or Antimicrobial14 or
                     Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or
                     Bacteriocin_IIi or Lactococcin or Antimicrobial17 or
                     Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin
                     or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or
                     TIGR03795 or TIGR03975 or TIGR01193 or (YcaO or
                     TIGR03604))"
                     /neighbourhood="5000"
                     /product="RiPP-like"
                     /protocluster_number="1"
     cand_cluster    1..4399
                     /candidate_cluster_number="1"
                     /contig_edge="True"
                     /detection_rules="(strepbact or Antimicrobial14 or
                     Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or
                     Bacteriocin_IIi or Lactococcin or Antimicrobial17 or
                     Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin
                     or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or
                     TIGR03795 or TIGR03975 or TIGR01193 or (YcaO or
                     TIGR03604))"
                     /kind="single"
                     /product="RiPP-like"
                     /protoclusters="1"
                     /tool="antismash"
     region          1..4399
                     /candidate_cluster_numbers="1"
                     /contig_edge="True"
                     /product="RiPP-like"
                     /region_number="1"
                     /rules="(strepbact or Antimicrobial14 or Bacteriocin_IId or
                     BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or
                     Lactococcin or Antimicrobial17 or Lactococcin_972 or
                     Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or
                     TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or
                     TIGR03975 or TIGR01193 or (YcaO or TIGR03604))"
                     /tool="antismash"
     gene            1283..3445
                     /ID="gene-HMPREF2699_05555"
                     /Name="HMPREF2699_05555"
                     /gbkey="Gene"
                     /gene_biotype="protein_coding"
                     /locus_tag="HMPREF2699_05555"
                     /source="Genbank"
     CDS             1283..3445
                     /Dbxref="NCBI_GP:OHP72277.1"
                     /ID="cds-OHP72277.1"
                     /Name="OHP72277.1"
                     /gbkey="CDS"
                     /gene="HMPREF2699_05555"
                     /gene_functions="biosynthetic (rule-based-clusters)
                     RiPP-like: TIGR01193"
                     /gene_functions="biosynthetic-additional
                     (rule-based-clusters) Peptidase_C39"
                     /gene_functions="transport (smcogs) SMCOG1288:ABC
                     transporter related protein (Score: 297.4; E-value:
                     3.5e-90)"
                     /gene_kind="biosynthetic"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_016931293.1"
                     /locus_tag="HMPREF2699_05555"
                     /phase="0"
                     /product="bacteriocin ABC transporter ATP-binding protein"
                     /protein_id="OHP72277.1"
                     /sec_met_domain="Peptidase_C39 (E-value: 8.3e-43, bitscore:
                     133.2, seeds: 36, tool: rule-based-clusters)"
                     /sec_met_domain="TIGR01193 (E-value: 3.9e-190, bitscore:
                     621.3, seeds: 5, tool: rule-based-clusters)"
                     /source="Protein Homology"
                     /transl_table=11
                     /translation="MNIKYIKQYDEKDCGPTCLAMISQSFGKRVSIPRLRDYAKTDKLG
                     TNLYGLIKAGEHIGIKLTGVKVDSVKELKKVELPIIAHIVNKQGYNHFVIIESLKKDKI
                     HIVDPAKGKYKLTKQQFNEIWTNIAVLVKKTESFNSRDESPSYMNIFTDIFKKNYKTLI
                     TIVIISVLINIIGIIGALYFKILTDNVIPSNVLSNLHTISIGVLILYIINALVTYLRYQ
                     MILKLSLEIDIGLMKDYFKHVLHLPMNFFDTRKSGEILQRFMDTSKIREALSSSTVTLL
                     VDTFMIIVGCVLLYLQSPTLLLITVIFIPFFILCSLMMKQPFEHYNQKVAENDAELSSY
                     LIESFDGSSTIKSYQSEPDRFEQGSQKFNQLINNLIRLGQLSNIQLTINNFLKITVSLV
                     ILWIGSYFVMNDQMTLGSLLAFNALTIFYLGPIERLINIQPTLQSSFVAARRIAEITDL
                     DTEDKLHDNNYPFIFNNVINMDNVKFQYGYRDVILDGINLKINKGQKIAIVGESGSGKS
                     TIGKLLNHYYDVAEGEISIDQRPINKIQLDELRHHIGYVSQETFLFADTILNNLLLGMN
                     KGKSKEDIINACQLAEAFDFIQKQPDQFNTMLEKEGSNLSGGQAQRISLARTFLKDPDI
                     YIFDEATSALDSRTEFKIMRHIDNLIQSGKTAIVISHKLSTIQNADVIYTLKNGKIVEK
                     GTHKNLLKNRNEYYKLWQLQTKNKEV"
     gene            4162..4398
                     /ID="gene-HMPREF2699_05560"
                     /Name="HMPREF2699_05560"
                     /gbkey="Gene"
                     /gene_biotype="protein_coding"
                     /locus_tag="HMPREF2699_05560"
                     /source="Genbank"
     CDS             4162..4398
                     /Dbxref="NCBI_GP:OHP72278.1"
                     /ID="cds-OHP72278.1"
                     /Name="OHP72278.1"
                     /gbkey="CDS"
                     /gene="HMPREF2699_05560"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /locus_tag="HMPREF2699_05560"
                     /phase="0"
                     /product="hypothetical protein"
                     /protein_id="OHP72278.1"
                     /source="GeneMarkS+"
                     /transl_table=11
                     /translation="MKMKTNIRTFSSKKLVLGIVTTVIGISTIALVSENAYASTSTVKS
                     QIVKNTTKPTTTVKTVKPIAVKNGSMSNRTDES"
ORIGIN
        1 cattttcctt ttattttgat gtatgtctca tcaatacgcc acttataata ggctttttta
       61 tgctttttct tccaaagctg atacaaaatt ggggcatatt cttgaactca acggtagacc
      121 gttgaatgat gaacgtttac accacgttcc cttaatattt cagatatatc acgataactc
      181 aatgcatatc ttagatagta gccaacggct acagtgataa catctttact gaattgttta
      241 tatctgaaat agttcataca aaagactcct ttttattaaa attatactat caattcaact
      301 ttgcaacaga acctttttta tcgatttccc gagatataac acttactttg agtttaagaa
      361 atttacaatg tctctacatt cttaaaattt gagctttatt attattaaat ataaattttc
      421 aagtttgttt tgttaattac gattaaatta aggatattag caattctact tcatcttatt
      481 aactagataa atcactaaaa acttactgat atgacagtat tttctagatt aatattatat
      541 taaacaaaat acaaattaag cttaatacta tattaataaa tcattgatac cataatgttg
      601 tagttgaaag gaaacaaaaa ctacgttacg taaataaaac acattattag gagggctggt
      661 atgcaaaatt taacaaatgc agaaactaaa aatgtgaatg gtggtaataa attcactgat
      721 gcggtgaatg ctacaaaaga ttggttcggc cgagtaggta aaggcgcgga caaagcacac
      781 gaagataatg gttggccata aaattaaata ttcaagaagt actaaaaaat ataaaggtgg
      841 taataacatg aaagaattaa cttatgatga acttattaaa aataacggtg gtaataatga
      901 aactgatcca gacggatttg ctgaacatgt tggttacggg attggcaaag tttctgatgg
      961 cgttaaaagt tttgttggta acgttgccga cgaacttaaa taatttaaat tataaaggat
     1021 ggtaatcatg aaacatttaa ctgaaaaaga tttaaaatct atcaatgctg gtgatttctg
     1081 gggagaccta ggaactatta ctggtaatgt tataaataga gtacctaaat ttggtaaaag
     1141 taaaagcaaa aatgataaat aagattaata tacttaatta acataattag ggctgggaca
     1201 taattttata tctcagccct cttctacata tttctttatc attctagtaa tttttgagac
     1261 aagctaagga agtggtaact caatgaacat taaatacatt aaacaatatg acgaaaaaga
     1321 ttgtgggcca acatgtctag ccatgatttc acaatcgttt ggcaaacgtg tatcaatacc
     1381 acgtttaaga gattatgcta agactgataa gcttgggaca aacttgtatg gtttgattaa
     1441 agctggagaa catattggca taaaattaac tggtgttaaa gtagattctg taaaagaatt
     1501 aaaaaaagta gaacttccaa ttattgcaca tattgtaaac aaacaaggat ataatcattt
     1561 tgttattatt gaatcactta aaaaagataa aattcatata gtagatccag ctaaaggtaa
     1621 gtataaatta accaaacaac aatttaatga aatatggaca aatattgctg tattagttaa
     1681 aaagacggaa tcatttaata gtagagatga atcaccttct tatatgaata tatttacgga
     1741 tatatttaaa aagaactata aaacactgat tacaatagtt ataatttctg tcttaataaa
     1801 tataattgga atcattggtg ctttatattt caaaatatta accgataacg tcattccatc
     1861 taatgtccta tcaaatttac atactataag cataggcgta ctaatacttt atataatcaa
     1921 tgcattagta acctatttga gatatcaaat gattttaaaa cttagtttag aaatagatat
     1981 tggccttatg aaagactact ttaaacatgt attacactta ccaatgaatt tttttgatac
     2041 acgtaaaagc ggagaaatat tgcaacgttt tatggatact tcaaaaattc gtgaagcact
     2101 atcatcttca accgtaacac tacttgtaga tacatttatg attatagttg ggtgtgtatt
     2161 attatattta caaagtccaa cgttgttgct cattacagtc atttttatac cattttttat
     2221 tttatgtagt ctaatgatga aacaaccatt cgaacactat aaccaaaaag ttgcagaaaa
     2281 tgatgcagaa ttgagttcat atttgattga atcttttgat ggtagtagca caataaaaag
     2341 ttaccaatca gagcctgatc gttttgaaca aggttcgcaa aagtttaatc aacttatcaa
     2401 caacttaata cgtttagggc aactttcaaa catacaactg acaattaata atttccttaa
     2461 aattactgtc agtttagtaa tcttatggat aggtagttat tttgttatga atgaccagat
     2521 gactttagga agtttgttag cgtttaatgc acttacaatt ttttatttag gtccaattga
     2581 acgtttaatt aacatacaac caacgttaca atcatcgttt gtggctgcta gacgcatcgc
     2641 ggaaataaca gatttagata ctgaagataa attacatgat aacaactatc catttatatt
     2701 taataacgtt ataaacatgg ataatgtaaa atttcaatat ggatatagag atgtcatttt
     2761 agacggtatt aacttaaaaa ttaataaagg acaaaaaatc gcaatcgttg gtgaaagtgg
     2821 aagcggaaaa tccacaattg gaaaactatt aaatcattat tatgacgtag cagagggtga
     2881 aatatctatt gaccaacgcc caattaacaa gatacaacta gatgaactaa gacatcacat
     2941 tggttacgtt tcacaagaaa ctttcttatt tgcagatact attttaaata atttactact
     3001 tggcatgaac aaaggaaaat caaaagaaga tattataaat gcatgtcaat tagctgaagc
     3061 ttttgatttc atccaaaaac aacccgatca attcaatact atgctagaaa aagaaggttc
     3121 aaacttatct ggcggacaag cacaacgtat ttcattagca cgaacatttc taaaggaccc
     3181 agatatttat atttttgatg aagcaacaag cgctttagac agtcgaactg aattcaaaat
     3241 catgcgacat attgataact taattcaaag tggtaaaaca gctattgtca tttctcataa
     3301 actaagtact atacaaaatg ctgatgttat ttataccttg aaaaatggaa agatagtaga
     3361 aaaaggtact cataaaaatt tattaaaaaa tcgaaatgaa tactataaac tatggcaatt
     3421 acaaactaaa aataaagaag tataacactc attaaaacac ggctttcaga atcgaataat
     3481 tattattcac tccacccttt ttcactgcaa acattacatc tgcagtcttt gaaagagggc
     3541 tttttttatg cctaaatcta actttgtgat aaatgtcgca aatgaaaata ggattgaaaa
     3601 tttatcactt ttaccacttt ttagagtgac aaaagtggag gaattttgaa agattttaat
     3661 cctaaattct caaaagattc tagacatctt atacttggtc aagaaaaaat aatattggta
     3721 ttgaaaatat agagaattta attttaacgc tatcatctga agatagcgtt ttttattttg
     3781 ttaaactagg agtatagatt ttagttatta aatggaatta gtgacaatta agttcataag
     3841 tttatgatgt ggttttctcc tgatgtcaca atgaaaaata tattggtaca tacatagggg
     3901 ataaataatg aaaaactggg ttatccaact taatgtcaaa gcttatgaaa ttttttgagg
     3961 aatcaaaaaa ttaagtacga ttgaccggaa acaaagaaat atttttaaat atccttgtga
     4021 taagtaattt attgctttgt tgttatatat gtttttacta atgttataag ttcttaattt
     4081 taagttaaac aataatttaa atattgcttt ttaaaaagca ttgtgtatta ttaaaattat
     4141 agaaaacatt aaggggaaaa aatgaaaatg aaaacgaata tacgtacttt ttctagtaag
     4201 aagttagtgc tagggattgt aacgactgtt attgggatta gcacaattgc tttagtaagt
     4261 gaaaatgcat atgcgagtac ttcgacagta aaatctcaaa tagtaaaaaa tacaactaaa
     4321 ccaactacaa cggtgaaaac agtaaagcct atagcggtaa aaaacggctc tatgtcaaat
     4381 cggactgatg agtcctaat
//
